STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756745Homeobox protein knotted-1-like 1. (158 aa)    
Predicted Functional Partners:
LOC106767283
Cytochrome P450 734A1; Belongs to the cytochrome P450 family.
      
 0.704
LOC106779425
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.697
LOC106772031
Protein TIFY 4B isoform X1.
      
 0.690
LOC106776141
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
      
 0.578
LOC106770723
B3 domain-containing transcription factor VRN1 isoform X1.
  
     0.513
LOC106753869
Uncharacterized protein At4g15970.
  
     0.506
LOC111242708
Protein SUPPRESSOR OF GENE SILENCING 3 homolog.
  
     0.490
LOC106769963
Uncharacterized protein LOC106769963.
  
     0.489
LOC106757814
Uncharacterized protein LOC106757814.
  
     0.478
LOC106772207
Uncharacterized protein LOC106772207.
  
     0.477
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.