STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756774Probable polygalacturonase At2g43860; Belongs to the glycosyl hydrolase 28 family. (474 aa)    
Predicted Functional Partners:
LOC106775075
Polygalacturonase At1g48100.
  
     0.502
LOC106773280
Probable polygalacturonase At3g15720.
  
     0.493
LOC106773281
Probable polygalacturonase At3g15720.
  
     0.487
LOC106773272
Probable polygalacturonase At3g15720.
  
     0.484
LOC106762602
Polygalacturonase-like.
  
     0.473
LOC106770640
Polygalacturonase-like.
  
     0.473
LOC106762591
Polygalacturonase-like.
  
     0.468
LOC106760560
Exopolygalacturonase-like.
  
     0.466
LOC106760083
Polygalacturonase-like.
  
     0.463
LOC106770642
Polygalacturonase-like; Belongs to the glycosyl hydrolase 28 family.
  
     0.426
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.