STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756794Nicotianamine synthase. (316 aa)    
Predicted Functional Partners:
LOC106776980
Urea-proton symporter DUR3; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.584
LOC106756833
Uncharacterized protein LOC106756833 isoform X1.
    
 0.583
LOC106757530
Beta-carotene isomerase D27, chloroplastic.
      
 0.580
LOC106770415
Beta-carotene isomerase D27, chloroplastic.
      
 0.545
LOC106753318
Ferric reduction oxidase 8, mitochondrial.
      
 0.544
LOC106759103
Ferric reduction oxidase 2.
      
 0.518
LOC106758565
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Belongs to the ferritin family.
      
 0.512
LOC106775835
Ferric reduction oxidase 7, chloroplastic.
      
 0.434
LOC106760034
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
      
 0.418
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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