STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756780Peptide chain release factor APG3, chloroplastic. (424 aa)    
Predicted Functional Partners:
LOC106758731
hemK methyltransferase family member 2.
  
 
 0.815
LOC106759688
Uncharacterized protein LOC106759688 isoform X1.
  
 
 0.815
LOC106779833
hemK methyltransferase family member 2.
  
 
 0.815
LOC106764118
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.796
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.741
LOC106757132
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.741
LOC106771010
Ribosome-recycling factor, chloroplastic.
 
 
 0.739
LOC106759824
50S ribosomal protein L27, chloroplastic.
  
 
 0.734
LOC106762739
Uncharacterized protein LOC106762739.
  
 
 0.734
LOC106766892
Uncharacterized protein LOC106766892.
  
 
 0.711
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.