STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756817Uncharacterized protein LOC106756817. (177 aa)    
Predicted Functional Partners:
LOC106764728
Uncharacterized protein At3g06530 isoform X1.
   
 0.958
LOC106772300
rRNA biogenesis protein RRP5.
   
 0.957
LOC106772442
Nucleolar protein 14.
   
 0.948
LOC106769022
WD repeat-containing protein 75.
   
 0.939
LOC106765128
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.935
LOC106769809
Protein SLOW WALKER 1.
   
 0.934
LOC106779594
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.933
LOC106777976
Nucleolar protein 6 isoform X1.
   
 0.928
LOC106769913
Probable U3 small nucleolar RNA-associated protein 7.
   
 0.924
LOC106769509
Something about silencing protein 10 isoform X1.
   
 0.918
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.