STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106756946Syntaxin-121; Belongs to the syntaxin family. (304 aa)    
Predicted Functional Partners:
LOC106770937
UPF0235 protein At5g63440.
    
   0.908
LOC106769219
Vesicle-fusing ATPase.
    
 0.763
LOC106764897
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 0.693
LOC106768703
SNARE-interacting protein KEULE; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.664
LOC106777995
SNARE-interacting protein KEULE isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.664
LOC106779431
Protein transport Sec1a-like; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.664
LOC106755304
Putative SNAP25 homologous protein SNAP30.
   
 0.658
LOC106757062
SNAP25 homologous protein SNAP33.
   
 0.658
LOC106765814
SNAP25 homologous protein SNAP33.
   
 0.658
LOC106753112
Alpha-soluble NSF attachment protein 2.
    
 0.582
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.