STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757019Uncharacterized protein LOC106757019. (544 aa)    
Predicted Functional Partners:
LOC106757164
ubiquitin-60S ribosomal protein L40.
    
  0.480
LOC106775784
ubiquitin-60S ribosomal protein L40.
    
  0.480
LOC106754412
E3 ubiquitin-protein ligase UPL4 isoform X1.
   
 
 0.472
LOC106756049
E3 ubiquitin-protein ligase UPL3.
   
 
 0.472
LOC106754417
E3 ubiquitin-protein ligase UPL4 isoform X1.
   
 
 0.472
LOC106761932
E3 ubiquitin-protein ligase UPL3.
   
 
 0.472
LOC106754105
UV-stimulated scaffold protein A homolog isoform X1.
    
 0.447
LOC106759238
ubiquitin-40S ribosomal protein S27a-like.
    
  0.429
LOC106759237
ubiquitin-40S ribosomal protein S27a-like.
    
  0.429
LOC106760727
ubiquitin-40S ribosomal protein S27a.
    
  0.429
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.