STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757067Selenocysteine methyltransferase. (337 aa)    
Predicted Functional Partners:
LOC106759378
Cystathionine gamma-synthase 1, chloroplastic.
  
 
 0.985
LOC106753903
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.980
LOC106752579
Cystathionine beta-lyase, chloroplastic.
  
 
 0.978
LOC106769753
Methionine gamma-lyase.
  
 
 0.976
LOC106772116
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.976
LOC106775874
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1.
  
 
 0.976
LOC106775326
Methionine gamma-lyase.
  
 
 0.975
LOC106756231
Adenosylhomocysteinase.
  
 
 0.973
LOC106776257
Adenosylhomocysteinase.
  
 
 0.973
LOC106757909
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.969
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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