STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757117E3 ubiquitin-protein ligase BAH1. (324 aa)    
Predicted Functional Partners:
LOC106759238
ubiquitin-40S ribosomal protein S27a-like.
    
 0.619
LOC106759237
ubiquitin-40S ribosomal protein S27a-like.
    
 0.619
LOC106760727
ubiquitin-40S ribosomal protein S27a.
    
 0.619
LOC106777027
ubiquitin-40S ribosomal protein S27a.
    
 0.619
LOC106776148
DEAD-box ATP-dependent RNA helicase 35.
    
 0.516
LOC106769048
Probable ubiquitin-conjugating enzyme E2 24.
    
 0.515
LOC106775244
Probable ubiquitin-conjugating enzyme E2 24.
    
 0.515
LOC106769546
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.498
LOC106777917
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.498
LOC106757164
ubiquitin-60S ribosomal protein L40.
    
  0.451
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.