STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757183Basic helix-loop-helix protein A. (576 aa)    
Predicted Functional Partners:
LOC106766504
Transcription factor MYB8.
    
 
 0.599
LOC106757963
WRKY transcription factor 44 isoform X1.
   
  
 0.547
LOC106764421
Transcription repressor MYB5.
    
 
 0.526
LOC106763495
Protein TRANSPARENT TESTA 1-like.
    
 0.483
LOC106753328
Transducin beta-like protein 3 isoform X1.
   
  
 0.445
LOC106758748
Transcription factor MYB90.
   
 
 0.440
LOC106769061
Naringenin,2-oxoglutarate 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.433
LOC106777796
Leucoanthocyanidin dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
   
  
 0.413
LOC106768325
Protein UPSTREAM OF FLC.
  
     0.412
LOC106772526
Uncharacterized protein LOC106772526.
  
     0.404
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.