STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757320Uncharacterized protein LOC106757320 isoform X1. (228 aa)    
Predicted Functional Partners:
LOC106759104
Pentatricopeptide repeat-containing protein At4g39530.
      
 0.811
LOC106762040
Myosin-12 isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.811
LOC106755930
Probable inactive receptor kinase At1g48480.
      
 0.803
LOC106776405
Zinc-finger homeodomain protein 6.
      
 0.717
LOC106757333
Thioredoxin-like 1-2, chloroplastic.
      
 0.714
LOC106754315
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
      
 0.667
LOC106774336
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
      
 0.667
LOC106772317
Probable inactive receptor kinase At1g48480.
      
 0.661
LOC106776876
Cellulose synthase-like protein D1; Belongs to the glycosyltransferase 2 family.
    
 0.608
LOC106768273
Sister chromatid cohesion protein PDS5 homolog A isoform X1.
      
 0.586
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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