STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757354Pectinesterase 3. (228 aa)    
Predicted Functional Partners:
LOC106780273
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
    
 0.710
LOC106767468
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
      
 0.694
LOC106776861
Probable mannitol dehydrogenase.
      
 0.582
LOC106777708
Probable mannitol dehydrogenase.
      
 0.582
LOC106777707
Probable mannitol dehydrogenase isoform X1.
      
 0.582
LOC106764136
Uncharacterized protein LOC106764136 isoform X1.
  
  
  0.499
LOC106769719
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
  
 
   0.491
LOC106760659
Uncharacterized protein LOC106760659.
  
     0.488
LOC106757520
Auxin-responsive protein SAUR71-like.
  
     0.483
LOC106774795
Uncharacterized protein LOC106774795.
  
     0.465
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.