STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757395Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (186 aa)    
Predicted Functional Partners:
LOC106776409
UPF0496 protein At2g18630-like.
  
  
  0.542
LOC106760395
Fasciclin-like arabinogalactan protein 3.
  
 
  0.514
LOC106759023
Protein GLUTAMINE DUMPER 6.
  
     0.508
LOC106769046
Uncharacterized protein At4g08330, chloroplastic-like.
  
     0.504
LOC106775407
Uncharacterized protein LOC106775407.
  
 
  0.499
LOC106771812
Uncharacterized GPI-anchored protein At3g06035 isoform X1.
  
     0.498
LOC106779605
Protein SCARECROW isoform X1; Belongs to the GRAS family.
  
     0.496
LOC106771821
Cysteine-rich repeat secretory protein 11-like.
  
  0.495
LOC106775595
Probable F-box protein At4g22030.
  
 
  0.494
LOC106777401
Remorin.
  
 
  0.493
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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