STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757411Uncharacterized protein LOC106757411. (1003 aa)    
Predicted Functional Partners:
LOC106765083
Uncharacterized protein LOC106765083.
   
  
 0.581
LOC106769918
Uncharacterized protein LOC106769918.
  
     0.530
LOC106757145
Uncharacterized protein LOC106757145.
  
     0.526
LOC106776335
Uncharacterized protein LOC106776335.
  
     0.510
LOC106778370
Protein IWS1 homolog 1.
      
 0.509
LOC106780396
Uncharacterized protein LOC106780396.
  
     0.482
LOC106762703
F-box/LRR-repeat protein At5g63520.
  
     0.480
LOC106759428
Uncharacterized protein LOC106759428 isoform X1.
  
     0.479
LOC106776735
Uncharacterized protein LOC106776735.
  
     0.464
LOC106754028
RING-H2 finger protein ATL22-like.
  
     0.458
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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