STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757477Rapid alkalinization factor. (114 aa)    
Predicted Functional Partners:
LOC106769933
DNA mismatch repair protein MSH3.
      
 0.690
LOC106776050
Uncharacterized WD repeat-containing protein C2A9.03.
      
 0.690
LOC106777687
DNA mismatch repair protein MLH3 isoform X1.
      
 0.690
LOC106763178
Nitrate regulatory gene2 protein.
      
 0.575
LOC106755532
Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.538
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.