STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757518Protein SAR DEFICIENT 1 isoform X1. (420 aa)    
Predicted Functional Partners:
LOC106775089
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.718
LOC106758743
Origin of replication complex subunit 5 isoform X1.
    
 
 0.657
LOC106762553
DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1.
    
 
 0.653
LOC106766773
Uncharacterized protein LOC106766773.
  
 
  0.588
LOC106779423
PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like.
  
    0.572
LOC106764369
LOB domain-containing protein 13 isoform X1.
  
   
 0.547
LOC106761034
Histone chaperone ASF1B.
   
 
 0.545
LOC106766530
Zinc finger protein 6-like.
  
     0.542
LOC106759616
Uncharacterized protein LOC106759616.
  
 
  0.540
LOC106771745
Transcription factor TGA4 isoform X1.
  
   
 0.539
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.