STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757610Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. (315 aa)    
Predicted Functional Partners:
LOC106764595
Deoxyhypusine synthase isoform X1.
   
 0.976
LOC106765375
Eukaryotic translation initiation factor 5A.
  
 0.971
LOC106766768
Eukaryotic translation initiation factor 5A.
  
 0.971
LOC106755327
Eukaryotic translation initiation factor 5A.
  
 0.951
LOC106758664
Uncharacterized protein LOC106758664.
  
 0.913
LOC106778748
Eukaryotic translation initiation factor 5A.
  
 0.912
LOC106756046
Uncharacterized protein LOC106756046 isoform X1.
  
 0.871
LOC106780119
Uncharacterized protein LOC106780119.
  
 0.871
LOC106771248
Zinc finger protein 593.
   
  
 0.764
LOC106774140
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
   
  
 0.723
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (28%) [HD]