STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757626Calmodulin-3. (148 aa)    
Predicted Functional Partners:
LOC106756098
Actin.
    
 0.967
LOC106759188
Actin.
    
 0.895
LOC106771984
Actin.
    
 0.895
LOC106757568
Actin-3.
    
 0.895
LOC106758624
Histone H3.2.
      
 0.703
LOC106773551
Histone H3-like centromeric protein cnp1.
      
 0.703
LOC106759153
Actin-11.
    
 0.662
LOC106779222
NO-associated protein 1, chloroplastic/mitochondrial.
     
  0.650
LOC106770112
Actin-1.
    
 0.637
LOC106775699
Actin-101.
    
 0.632
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.