STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757620Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1174 aa)    
Predicted Functional Partners:
LOC106762259
Eukaryotic translation initiation factor 2 subunit 3, X-linked-like.
      
 0.947
LOC106772723
Gibberellin receptor GID1C.
      
 0.670
LOC106757833
Gibberellin receptor GID1B.
      
 0.668
LOC106772549
Gibberellin receptor GID1B isoform X1.
      
 0.668
LOC106774531
Tryptophan synthase.
      
 0.588
LOC106768641
Inositol-3-phosphate synthase.
    
 
 0.557
LOC106762936
DELLA protein GAI; Belongs to the GRAS family.
      
 0.546
LOC106772306
Protein GIGANTEA isoform X1.
      
 0.525
LOC106756596
Inositol-3-phosphate synthase.
    
 
 0.485
LOC106756346
Inositol-3-phosphate synthase-like.
    
 
 0.485
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.