STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757774Ubiquitin-conjugating enzyme E2 variant 1C. (146 aa)    
Predicted Functional Partners:
LOC106757164
ubiquitin-60S ribosomal protein L40.
    
 0.768
LOC106775784
ubiquitin-60S ribosomal protein L40.
    
 0.768
LOC106776419
Probable ubiquitin-conjugating enzyme E2 16 isoform X1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.745
LOC106753879
Ubiquitin-conjugating enzyme E2 22; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.732
LOC106759238
ubiquitin-40S ribosomal protein S27a-like.
   
 0.712
LOC106759237
ubiquitin-40S ribosomal protein S27a-like.
   
 0.712
LOC106760727
ubiquitin-40S ribosomal protein S27a.
   
 0.712
LOC106777027
ubiquitin-40S ribosomal protein S27a.
   
 0.712
LOC106775089
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.701
LOC106762183
Protein SIP5.
    
   0.695
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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