STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757780Vacuolar protein sorting-associated protein 35B-like. (567 aa)    
Predicted Functional Partners:
LOC106765258
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.977
LOC106762565
Vacuolar protein sorting-associated protein 26A.
   
 0.930
LOC106778673
Vacuolar protein sorting-associated protein 26A-like isoform X1.
   
 0.930
LOC106777647
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
  
  
 
0.901
LOC106765154
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
  
  
 
0.900
LOC106772807
Sorting nexin 1 isoform X1.
   
 
 0.566
LOC106762223
Uncharacterized protein LOC106762223.
   
 
 0.562
LOC106769149
Uncharacterized protein LOC106769149.
   
 
 0.562
LOC106762840
ABC transporter ATP-binding protein/permease PDR18-like.
   
 
 0.562
LOC106756572
Photosystem II stability/assembly factor HCF136, chloroplastic isoform X1.
    
 
 0.530
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.