STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757891proline--tRNA ligase, cytoplasmic. (510 aa)    
Predicted Functional Partners:
LOC106779146
methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
LOC106772540
glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.990
LOC106772284
glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.986
LOC106756140
isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.983
LOC106777643
leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.954
LOC106773016
Lysine--tRNA ligase.
  
 0.933
LOC106768778
isoleucine--tRNA ligase, chloroplastic/mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.926
LOC106771666
isoleucine--tRNA ligase, chloroplastic/mitochondrial-like.
   
 0.926
LOC106773195
isoleucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1.
   
 0.926
LOC106774263
proline--tRNA ligase, chloroplastic/mitochondrial.
  
 
 
0.906
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.