STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757933GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)    
Predicted Functional Partners:
LOC106756120
Protein transport protein SEC31 homolog B.
   
 0.989
LOC106768790
SEC12-like protein 2 isoform X1.
   
 0.982
LOC106769777
SEC12-like protein 1.
   
 0.982
LOC106765529
Protein transport protein SEC13 homolog B; Belongs to the WD repeat SEC13 family.
   
 0.958
LOC106770851
Protein transport protein SEC13 homolog B-like; Belongs to the WD repeat SEC13 family.
   
 0.958
LOC106770945
Protein transport protein SEC13 homolog B-like; Belongs to the WD repeat SEC13 family.
   
 0.958
LOC106756386
Protein transport protein Sec24-like At3g07100.
   
 0.788
LOC106757607
Protein transport protein Sec24-like At3g07100 isoform X1.
   
 0.788
LOC106772111
Protein transport protein Sec24-like At3g07100.
   
 0.788
LOC106757703
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.737
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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