STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106757898Caffeoylshikimate esterase isoform X1. (346 aa)    
Predicted Functional Partners:
LOC106753926
Cytochrome P450 98A2; Belongs to the cytochrome P450 family.
     
 0.934
LOC106761921
4-coumarate--CoA ligase 1-like.
    
 0.877
LOC106777872
4-coumarate--CoA ligase 2.
    
 0.877
LOC106778160
4-coumarate--CoA ligase 2-like.
    
 0.877
LOC106779613
LOW QUALITY PROTEIN: 4-coumarate--CoA ligase-like 1.
    
 0.877
LOC106759615
4-coumarate--CoA ligase-like 7.
    
 0.876
LOC106777374
4-coumarate--CoA ligase-like 7.
    
 0.876
LOC106764425
Caffeic acid 3-O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
     
 0.835
LOC106776996
4-coumarate--CoA ligase-like 6.
    
 0.833
LOC106768751
4-coumarate--CoA ligase 1-like.
    
 0.825
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.