STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10675815460S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family. (155 aa)    
Predicted Functional Partners:
LOC106761544
60S ribosomal protein L39.
   
 0.990
LOC106775255
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.990
LOC106754581
Ribosome maturation protein SBDS.
   
 
 0.976
LOC106755547
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.975
LOC106773736
60S ribosomal protein L37a.
   
 
 0.975
LOC106760925
40S ribosomal protein S10-1-like.
   
 
 0.974
LOC106771251
40S ribosomal protein S29.
  
 0.972
LOC106776919
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.971
LOC106777549
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.971
LOC106764007
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.968
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.