STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758160Outer envelope pore protein 16, chloroplastic. (143 aa)    
Predicted Functional Partners:
LOC106758702
Uncharacterized protein At5g01610.
  
     0.482
LOC106770825
Uncharacterized protein At5g01610.
  
     0.460
LOC106767177
UPF0548 protein At2g17695 isoform X1.
      
 0.431
LOC106756254
Protein IQ-DOMAIN 1 isoform X1.
  
     0.427
LOC106759890
Pentatricopeptide repeat-containing protein At1g20300, mitochondrial.
      
 0.424
LOC106771311
Outer envelope pore protein 16-4, chloroplastic.
      
 0.424
LOC106774459
Heterogeneous nuclear ribonucleoprotein F.
      
 0.424
LOC106776214
Uncharacterized protein LOC106776214.
  
     0.419
LOC106772276
Uncharacterized protein LOC106772276.
      
 0.416
LOC106767472
Uncharacterized protein LOC106767472.
  
     0.414
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.