STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758159GEM-like protein 5. (286 aa)    
Predicted Functional Partners:
LOC106772411
Uncharacterized protein LOC106772411.
  
     0.505
LOC106764868
Uncharacterized protein LOC106764868.
  
     0.497
LOC106757386
VAN3-binding protein.
  
     0.495
LOC106771479
VAN3-binding protein.
  
     0.494
LOC106776347
Uncharacterized protein At1g04910.
  
     0.489
LOC106779166
Uncharacterized protein LOC106779166.
  
     0.485
LOC106768050
Uncharacterized protein At1g04910.
  
     0.471
LOC106765449
Uncharacterized protein LOC106765449.
  
     0.468
LOC106775691
Uncharacterized protein LOC106775691.
  
     0.458
LOC106769855
Uncharacterized protein LOC106769855.
  
     0.439
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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