STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758281Uncharacterized protein LOC106758281. (419 aa)    
Predicted Functional Partners:
LOC106769074
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.564
LOC106772100
methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1.
    
 0.564
LOC106765660
DNA-directed RNA polymerases II, IV and V subunit 3.
    
  0.558
LOC106755651
DNA-directed RNA polymerases II, IV and V subunit 11.
    
  0.555
LOC106753616
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.545
LOC106773557
DNA-directed RNA polymerase II subunit 4.
    
  0.527
LOC106761461
DNA-directed RNA polymerases II, IV and V subunit 8B; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.519
LOC106769948
DNA-directed RNA polymerases II, IV and V subunit 8B; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.519
LOC106770877
DNA-directed RNA polymerases II, IV and V subunit 6A.
    
 0.445
LOC106771260
DNA-directed RNA polymerases II, IV and V subunit 6A.
    
 0.445
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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