STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758323UV-B-induced protein At3g17800, chloroplastic isoform X1. (424 aa)    
Predicted Functional Partners:
LOC106775343
Uncharacterized protein LOC106775343.
  
     0.510
LOC106775353
Uncharacterized protein LOC106775353.
  
     0.489
LOC106774274
Vegetative cell wall protein gp1-like isoform X1.
  
     0.481
LOC106778755
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.468
LOC106761399
Uncharacterized protein LOC106761399.
  
     0.447
LOC106771952
Uncharacterized protein LOC106771952.
  
     0.442
LOC106778681
12S seed storage globulin 1-like.
  
     0.434
LOC106758740
Glutelin type-B 4.
  
     0.432
LOC106768269
Probable mitochondrial adenine nucleotide transporter BTL3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
     0.428
LOC106754915
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.425
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.