STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758477PI-PLC X domain-containing protein At5g67130. (364 aa)    
Predicted Functional Partners:
LOC106774601
39S ribosomal protein L46, mitochondrial.
   
   0.639
LOC106755549
54S ribosomal protein L24, mitochondrial.
   
 
 0.615
LOC106757207
39S ribosomal protein L47, mitochondrial.
   
 
 0.575
LOC106761078
39S ribosomal protein L41-A, mitochondrial.
   
 
 0.564
LOC106774979
50S ribosomal protein L6, chloroplastic; Belongs to the universal ribosomal protein uL6 family.
   
   0.554
LOC106773683
54S ribosomal protein L34, mitochondrial.
   
 
 0.527
LOC106767232
54S ribosomal protein L51, mitochondrial.
    
   0.524
LOC106756018
Uncharacterized protein LOC106756018.
   
 
 0.521
LOC106764124
Uncharacterized protein LOC106764124 isoform X1.
   
 
 0.521
LOC106754997
50S ribosomal protein L3-2, chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
   0.510
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.