STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758409Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like. (145 aa)    
Predicted Functional Partners:
LOC106765463
Arogenate dehydrogenase 1, chloroplastic.
    
 0.685
LOC106756143
Arogenate dehydrogenase 1, chloroplastic-like.
    
 0.678
LOC106773079
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.569
LOC106757904
Diaminopimelate decarboxylase 1, chloroplastic.
  
 
 0.561
LOC106761805
Ornithine decarboxylase-like; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.561
LOC106765342
4-hydroxyphenylpyruvate dioxygenase isoform X1.
   
 
 0.530
LOC106757894
Diaminopimelate epimerase, chloroplastic isoform X1.
  
 
 0.524
LOC106771151
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic.
    
 0.517
LOC106755004
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
  
 0.514
LOC106771122
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
  
 
 0.503
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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