STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758574Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (281 aa)    
Predicted Functional Partners:
LOC106765258
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.694
LOC106762565
Vacuolar protein sorting-associated protein 26A.
    
 
 0.632
LOC106778673
Vacuolar protein sorting-associated protein 26A-like isoform X1.
    
 
 0.632
LOC106757780
Vacuolar protein sorting-associated protein 35B-like.
   
 
 0.500
LOC106765069
Protein sip5.
   
 
 0.500
LOC106765154
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.500
LOC106777647
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.500
LOC106764978
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.458
LOC106756572
Photosystem II stability/assembly factor HCF136, chloroplastic isoform X1.
    
 0.420
LOC106763078
Photosystem II stability/assembly factor HCF136, chloroplastic-like.
    
 0.420
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.