STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10675859540S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (247 aa)    
Predicted Functional Partners:
LOC106755547
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.990
LOC106760925
40S ribosomal protein S10-1-like.
   
 0.990
LOC106764007
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.990
LOC106771251
40S ribosomal protein S29.
   
 0.989
LOC106777549
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.979
LOC106773736
60S ribosomal protein L37a.
   
 
 0.973
rps2
30S ribosomal protein S2, chloroplastic.
   
 0.966
LOC106769951
U3 small nucleolar ribonucleoprotein protein IMP3.
   
 0.966
LOC106775255
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.965
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
   
 0.963
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.