STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758652Uncharacterized protein At5g19025. (218 aa)    
Predicted Functional Partners:
LOC106780534
Auxin-induced protein 6B-like.
  
     0.501
LOC106755958
Protein MIZU-KUSSEI 1-like.
  
     0.496
LOC106764531
Flowering-promoting factor 1-like protein 2.
  
     0.496
LOC106761808
Flowering-promoting factor 1-like protein 1.
  
     0.491
LOC106770028
Auxin-induced protein 15A-like.
  
     0.478
LOC106779818
Peroxidase 20-like; Belongs to the peroxidase family.
  
     0.472
LOC111240924
Auxin-induced protein 15A-like.
  
     0.471
LOC106772084
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.468
LOC106759936
Uncharacterized protein LOC106759936.
  
     0.466
LOC106766805
Pectinesterase inhibitor 7.
  
     0.458
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.