STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106758658Zinc finger protein 1. (302 aa)    
Predicted Functional Partners:
LOC106756347
L-ascorbate peroxidase, cytosolic; Belongs to the peroxidase family.
      
 0.692
LOC106765542
Protein WVD2-like 5.
  
 0.568
LOC106760750
Nitrate regulatory gene2 protein.
  
 
   0.534
LOC106760880
BURP domain protein RD22.
  
 
  0.521
LOC106757399
Non-specific lipid-transfer protein-like protein At2g13820 isoform X1; Belongs to the plant LTP family.
  
 
  0.519
LOC106753539
Embryonic abundant protein USP92.
  
 
  0.516
LOC106755881
F-box protein At2g27310.
  
     0.513
LOC106779121
F-box protein At2g27310.
  
     0.507
LOC106761933
Uncharacterized protein LOC106761933.
   
 0.500
LOC106764430
UPF0496 protein At1g20180.
  
 
  0.497
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.