STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759125Zinc transporter 1-like. (327 aa)    
Predicted Functional Partners:
LOC106758335
DExH-box ATP-dependent RNA helicase DExH17.
      
 0.457
LOC106763228
DNA mismatch repair protein MSH5.
      
 0.429
LOC106758432
TPR repeat-containing protein ZIP4.
      
 0.426
LOC106777308
DNA mismatch repair protein MSH4.
      
 0.420
LOC106760471
Wall-associated receptor kinase-like 14.
   
  
 0.418
LOC106756451
Sorting and assembly machinery component 50 homolog.
    
 
 0.410
LOC106763160
Sorting and assembly machinery component 50 homolog.
    
 
 0.410
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.