STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759387Carboxypeptidase; Belongs to the peptidase S10 family. (506 aa)    
Predicted Functional Partners:
LOC106753804
LOW QUALITY PROTEIN: tropinone reductase homolog At2g30670-like.
    
 
 0.583
LOC106757263
Tropinone reductase homolog At5g06060.
    
 
 0.583
LOC106772813
Tropinone reductase homolog.
    
 
 0.583
LOC106753854
Tropinone reductase homolog At2g29260, chloroplastic.
    
 
 0.548
LOC106757583
Tropinone reductase homolog At5g06060.
    
 
 0.548
LOC106757582
Tropinone reductase homolog At5g06060.
    
 
 0.548
LOC106757821
Tropinone reductase homolog At5g06060.
    
 
 0.548
LOC106758661
Tropinone reductase homolog.
    
 
 0.548
LOC106759452
Tropinone reductase homolog.
    
 
 0.548
LOC106753041
Serine--glyoxylate aminotransferase.
      
 0.546
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.