STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759479Phosphoglucan phosphatase LSF1, chloroplastic. (582 aa)    
Predicted Functional Partners:
LOC106763055
Maltose excess protein 1, chloroplastic.
  
   
 0.718
LOC106777832
Phosphatidylinositol 3-kinase, root isoform isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.624
LOC106755642
Uncharacterized protein LOC106755642.
   
 
 0.614
LOC106752488
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.606
LOC106752500
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.606
LOC106752771
Serine/threonine-protein kinase SRK2A; Belongs to the protein kinase superfamily.
    
 0.606
LOC106753361
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.606
LOC106754722
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.606
LOC106754933
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.606
LOC106759158
SNF1-related protein kinase catalytic subunit alpha KIN10 isoform X1; Belongs to the protein kinase superfamily.
    
 0.606
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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