STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759581Transcription factor ICE1 isoform X1. (435 aa)    
Predicted Functional Partners:
LOC106779746
Trihelix transcription factor GTL1.
  
   
 0.653
LOC106777810
E3 ubiquitin-protein ligase HOS1 isoform X1.
    
 
 0.587
LOC106764047
Ethylene-responsive transcription factor RAP2-1.
      
 0.580
LOC106772783
Trihelix transcription factor GTL2.
      
 0.580
LOC106752444
EPIDERMAL PATTERNING FACTOR-like protein 6.
  
   
 0.543
LOC106764336
EPIDERMAL PATTERNING FACTOR-like protein 5.
  
   
 0.521
LOC106771489
Uncharacterized protein LOC106771489.
  
     0.517
LOC106770127
F-box protein At2g32560-like.
  
 
   0.517
LOC111240599
RPM1-interacting protein 4-like.
  
     0.516
LOC111241785
Uncharacterized protein LOC111241785.
  
     0.516
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.