STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759588F-box/kelch-repeat protein At5g15710. (438 aa)    
Predicted Functional Partners:
LOC106763882
Uncharacterized protein LOC106763882 isoform X1.
  
   
 0.523
LOC106759721
Uncharacterized protein LOC106759721.
  
   
 0.514
LOC106776852
Uncharacterized protein LOC106776852.
  
     0.503
LOC106778570
Uncharacterized protein LOC106778570.
  
     0.497
LOC106776298
Mediator of RNA polymerase II transcription subunit 32.
  
     0.495
LOC106776403
Uncharacterized protein LOC106776403.
  
     0.495
LOC106777317
Uncharacterized protein LOC106777317.
  
     0.493
LOC106764006
Uncharacterized protein LOC106764006.
  
     0.453
LOC106780273
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.449
LOC106761845
Pentatricopeptide repeat-containing protein At5g55840.
      
 0.439
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.