STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759614Ninja-family protein AFP3. (383 aa)    
Predicted Functional Partners:
LOC106769533
Uncharacterized protein LOC106769533.
  
     0.529
LOC106776513
Uncharacterized protein LOC106776513.
  
     0.522
LOC106778614
Transcription factor TCP4.
  
     0.519
LOC106771019
Uncharacterized protein LOC106771019.
  
     0.518
LOC106767869
Uncharacterized protein LOC106767869 isoform X1.
  
   
 0.515
LOC106762847
Transcription factor bHLH130.
  
     0.507
LOC106771200
SHUGOSHIN 2 isoform X1.
  
     0.507
LOC106757249
Transcription factor bHLH130.
  
     0.505
LOC106757905
Uncharacterized protein LOC106757905.
  
     0.504
LOC106755770
Transcription factor bHLH130 isoform X1.
  
     0.503
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.