STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759713Zinc-finger homeodomain protein 2. (304 aa)    
Predicted Functional Partners:
LOC106769180
CRS2-associated factor 1, chloroplastic.
  
     0.517
LOC106779930
AT-hook motif nuclear-localized protein 28-like.
  
     0.517
LOC106761130
Protein LATERAL ROOT PRIMORDIUM 1.
  
     0.512
LOC106778142
GEM-like protein 2.
  
     0.511
LOC106777359
GLABRA2 expression modulator isoform X1.
  
     0.506
LOC106779383
CRS2-associated factor 1, chloroplastic-like isoform X1.
  
     0.503
LOC106759129
Zinc finger protein ZAT6-like isoform X1.
  
     0.501
LOC106779251
Protein LATERAL ROOT PRIMORDIUM 1.
  
     0.501
LOC106776296
Growth-regulating factor 5.
  
     0.493
LOC106766990
MACPF domain-containing protein At4g24290.
  
     0.492
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.