STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759742Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3. (337 aa)    
Predicted Functional Partners:
LOC106769928
Pentatricopeptide repeat-containing protein At4g30825, chloroplastic.
      
 0.586
LOC106755359
Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic.
  
     0.521
LOC106761020
Uncharacterized protein LOC106761020.
  
     0.516
LOC106754239
Uncharacterized protein LOC106754239.
  
     0.513
LOC106755577
Protein LOW PSII ACCUMULATION 2, chloroplastic.
  
     0.503
LOC106767054
Uncharacterized protein LOC106767054 isoform X1.
  
     0.493
LOC106769867
Protein EFFECTOR OF TRANSCRIPTION 2.
  
     0.486
LOC106762033
Protein EFFECTOR OF TRANSCRIPTION 2-like.
  
     0.485
LOC111240562
Phosphoinositide phosphatase SAC7-like.
  
     0.476
LOC106765820
Uncharacterized protein LOC106765820.
  
     0.473
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.