STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759738Protein FAR1-RELATED SEQUENCE 5 isoform X1. (242 aa)    
Predicted Functional Partners:
LOC106753584
Uncharacterized protein LOC106753584.
  
     0.473
LOC106778367
Uncharacterized protein LOC106778367.
  
     0.448
LOC106777457
Protein FAF-like, chloroplastic.
  
     0.434
LOC106755011
Protein UPSTREAM OF FLC isoform X1.
  
     0.432
LOC106757145
Uncharacterized protein LOC106757145.
  
     0.432
LOC106778558
Protein NDR1.
  
     0.430
LOC106780396
Uncharacterized protein LOC106780396.
  
     0.427
LOC106753120
Protein FAF-like, chloroplastic.
  
     0.426
LOC106761166
VQ motif-containing protein 9.
  
     0.423
LOC106765664
Uncharacterized protein LOC106765664.
  
     0.421
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.