STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759821Cell number regulator 6. (241 aa)    
Predicted Functional Partners:
LOC106754577
Ankyrin-3.
    
 0.653
LOC106765239
Zinc finger CCCH domain-containing protein 40.
   
 0.557
LOC106776265
Zinc finger CCCH domain-containing protein 40-like isoform X1.
   
 0.557
LOC106769600
Serine/threonine-protein phosphatase 5.
  
 
 0.556
LOC106773702
Stem 31 kDa glycoprotein.
     
 0.545
LOC106773787
Stem 28 kDa glycoprotein-like.
     
 0.545
LOC111242239
Uncharacterized protein LOC111242239.
     
 0.545
LOC106762118
PX domain-containing protein EREX.
    
 0.537
LOC106762601
PX domain-containing protein EREL1 isoform X1.
    
 0.537
LOC106771825
Uncharacterized protein LOC106771825 isoform X1.
    
 0.537
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.