STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759829Protein TIFY 10B. (257 aa)    
Predicted Functional Partners:
LOC106757925
Coronatine-insensitive protein 1.
    
 0.966
LOC106765080
Coronatine-insensitive protein 1.
    
 0.966
LOC106768977
Transcription factor MYC2-like.
   
 0.938
LOC106777770
Transcription factor MYC2.
   
 0.938
LOC106772803
Ninja-family protein mc410.
  
 
 
 0.640
LOC106771713
Transcription factor MYB23.
      
 0.575
LOC106769447
Zinc finger CCCH domain-containing protein 20.
      
 0.546
LOC106773159
Zinc finger CCCH domain-containing protein 20.
      
 0.546
LOC106775036
E3 ubiquitin-protein ligase MIEL1.
      
 0.545
LOC106753041
Serine--glyoxylate aminotransferase.
   
  
 0.502
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.