STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759840Nuclear transcription factor Y subunit C-1. (223 aa)    
Predicted Functional Partners:
LOC106755835
DNA polymerase epsilon subunit 3.
    
 0.804
LOC106765051
Nuclear transcription factor Y subunit A-1.
    
 0.761
LOC106776012
Nuclear transcription factor Y subunit A-1 isoform X1.
    
 0.758
LOC106770534
Nuclear transcription factor Y subunit B-4.
  
 0.648
LOC106754713
Nuclear transcription factor Y subunit B-7-like.
  
 0.608
LOC106780071
Nuclear transcription factor Y subunit B-3.
  
 0.604
LOC106757985
Nuclear transcription factor Y subunit B-1.
  
 0.594
LOC106770185
Nuclear transcription factor Y subunit B-9-like.
  
 0.593
LOC106767780
Nuclear transcription factor Y subunit B-3.
  
 0.592
LOC106754408
Nuclear transcription factor Y subunit B-1 isoform X1.
  
 0.590
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.