STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759844NDR1/HIN1-like protein 13. (260 aa)    
Predicted Functional Partners:
LOC106765268
Uncharacterized protein LOC106765268.
  
     0.480
LOC106769520
Uncharacterized protein LOC106769520.
  
     0.477
LOC106768240
Uncharacterized protein LOC106768240.
  
     0.472
LOC106777575
Zinc finger CCCH domain-containing protein 55 isoform X1.
  
     0.467
LOC106771890
Uncharacterized protein LOC106771890.
  
     0.463
LOC106755268
Ninja-family protein AFP1.
  
     0.462
LOC106772745
Uncharacterized protein LOC106754383 isoform X1.
  
     0.456
LOC106771388
Uncharacterized protein LOC106771388.
  
     0.453
LOC106766535
Uncharacterized protein DDB_G0271670.
  
     0.450
LOC106771381
Zinc finger protein GIS3.
  
     0.450
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.