STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10675984530S ribosomal protein 2, chloroplastic. (241 aa)    
Predicted Functional Partners:
LOC106773997
Serine/arginine-rich splicing factor SC35.
  
 
 0.669
LOC106760376
50S ribosomal protein 6, chloroplastic.
    
 
 0.618
LOC106773367
30S ribosomal protein S31, chloroplastic.
   
 
 0.557
LOC106778636
30S ribosomal protein S31, chloroplastic.
   
 
 0.557
LOC106771011
Organelle RRM domain-containing protein 1, chloroplastic isoform X1.
  
    0.541
LOC106763931
Zinc finger CCCH domain-containing protein 25 isoform X1.
  
 
 
 0.538
LOC106772311
Glycine-rich RNA-binding protein RZ1C.
  
     0.538
LOC106770499
Organelle RRM domain-containing protein 6, chloroplastic.
  
     0.537
LOC106754016
Organelle RRM domain-containing protein 2, mitochondrial isoform X1.
  
     0.535
LOC106757302
Organelle RRM domain-containing protein 2, mitochondrial.
  
     0.535
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.