STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106759878Beta-hexosaminidase. (611 aa)    
Predicted Functional Partners:
LOC106762471
Alpha-galactosidase.
   
 
 0.957
LOC106759200
Alpha-galactosidase.
   
 
 0.953
LOC106769890
Alpha-galactosidase.
   
 
 0.940
LOC106770892
Alpha-(1,4)-fucosyltransferase.
    
 0.927
fuct
Glycoprotein 3-alpha-L-fucosyltransferase A.
    
 0.927
LOC106762651
Beta-galactosidase.
  
 
 0.913
LOC106775580
Uncharacterized protein At4g19900.
     
  0.900
LOC106770172
LOW QUALITY PROTEIN: uncharacterized protein At4g19900.
     
  0.900
LOC106764220
Acidic mammalian chitinase; Belongs to the glycosyl hydrolase 18 family.
    
 0.826
LOC106766479
Acidic mammalian chitinase; Belongs to the glycosyl hydrolase 18 family.
    
 0.826
Your Current Organism:
Vigna radiata
NCBI taxonomy Id: 3916
Other names: Phaseolus aureus, Phaseolus aureus Roxb., Phaseolus radiatus, Phaseolus radiatus L., V. radiata var. radiata, Vigna radiata var. radiata, golden gram, green gram, mung bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.